r**********e 发帖数: 587 | 1 谢谢。
你说的非常对,PCR来检测DNA repair非常罕见
我要解释一下,
我压根不是做DNA damage/repair的,我有兴趣的一段疾病相关的序列repetitive
simple sequence,根据各种原因我相当怀疑是和DNA damage/repair相关的。我的
hypothesis是:这段疾病相关的repetitive序列或许更加vulnerable to 外界的DNA
damage, 或者DNA repair的修复能力跟其他普通序列不同,从而能为疾病机制提供新
的发现
我看了大部分DNA damage/repair领域的文章,我感觉大部分的工作都是global的比如
测量一下DNA损伤的marker比如H2AZ或者H3k56ac的level。但我的兴趣一定是需要精确
到DNA-specific或者gene-specific的
能精确到sequence-specific的我能想到的也就是PCR了
相关的研究也有,比如:
http://www.ncbi.nlm.nih.gov/pubmed/24371283
我顺便也好奇问下,repair领域大家是不care ge... 阅读全帖 |
|
r**********e 发帖数: 587 | 2 1. 不同个体之间的各种SVs大概有多少?
SV的问题是,有不同种类deletion,insertion,duplication, CNV, translocation,
inversion, segmental duplication...
而且有不同的size,小的1bp,大的好几MB
这两个维度都是SNP研究里不曾遇到的
如果你要问一个human being有多少SV? 我觉得目前都无法回答。因为目前的研究大部
分还是基于short reads的针对基因组的uniq sequence。真正SV hotspot是repetitive
region,但我们无法研究。当然,对于NA12828,人们做了大量研究,really high-
depth seq, Pacbio long reads,或许对这个样本的总结可以给你答案
所以不管是NGS技术,还是后续的计算,SV都是基因组学最大的难关;而难关中的难关
就是那些repetitive seq。
2. 这些SVs是不是对于以后个性化治疗什么的极为重要
对于非常巨大的比如1MB deletion,一般会造成新生儿的neurodevelop... 阅读全帖 |
|
发帖数: 1 | 3 这样大量过滤掉了 ,按默认设置没看到多少repetitive regions,特别是SINEs
:所谓的repetitive区域其实也还是会有多态性,所以还是会有uniquely mapped
reads
:。建议直接默认设置做就是了。先做出一个结果,再调整参数。 |
|
a*****g 发帖数: 19398 | 4 魁北克试验采用类似美国方法教数学,结果挂了
Canada Quebec’s math reform -- epic fail
ttp://kitchentablemath.blogspot.com/2014/08/1st-major-study-of-reform-math-
epic-fail.html
In the August 2014 issue of Economics of Education Review:
Abstract
We investigate the impact of an ambitious provincial school reform in Canada
on students’ mathematical achievements. It is the first paper to exploit a
universal school reform of this magnitude to identify the causal effect of
a widely supported teaching approach on students’ m... 阅读全帖 |
|
y*****t 发帖数: 264 | 5 去年的简短会议总结(informal--sorry):附件贴不上,有点乱。
2010 CMG pathology meetings breif summary
_____________________________________________________________________
Speaker 1
1:00-1:30 pm Dr. Ming Zhou
1:30-1:45 pm Q&A with Dr. Zhou
Associate professor and staff pathologist in the the
Pathology and Laboratory Medicine Institute, Cleveland Clinic.
Topics Covered:
1. Welcome remarks from CAPA president.
2. Recommended reading for the first year.
CAPA lin... 阅读全帖 |
|
y*****t 发帖数: 264 | 6 去年的简短会议总结(informal--sorry):附件贴不上,有点乱。
2010 CMG pathology meetings breif summary
_____________________________________________________________________
Speaker 1
1:00-1:30 pm Dr. Ming Zhou
1:30-1:45 pm Q&A with Dr. Zhou
Associate professor and staff pathologist in the the
Pathology and Laboratory Medicine Institute, Cleveland Clinic.
Topics Covered:
1. Welcome remarks from CAPA president.
2. Recommended reading for the first year.
CAPA lin... 阅读全帖 |
|
发帖数: 1 | 7 QUANTUM SPACE ELEMENTS (QSE)
INTRODUCTION
This is a non-mathematical proposal introducing a cosmological model that is
cyclic, deterministic and infinity-free. For the purpose of achieving this
objective a number of new concepts are introduced. The framework of this
proposal is structured over a number of assumptions, leading to various
considerations of cosmological concerns. Furthermore, verification methods
are suggested of both, observational and mathematical nature.
ASSUMPTIONS
Space is dis... 阅读全帖 |
|
T******t 发帖数: 420 | 8 【 以下文字转载自 Parenting 讨论区 】
发信人: ThisThat (TicTac), 信区: Parenting
标 题: **推荐一本严重非主流但非常有启发的儿童心理类书**
发信站: BBS 未名空间站 (Mon Jun 7 14:03:14 2010, 美东)
“A BOY WHO WAS RAISED AS A DOG"
- What Traumatized Children Can Teach Us About Loss, Love and Healing
这本书是一个儿童心理医生Bruce Perry和一个记者的合著。里面收录的都是这个医生
亲手治疗过的案例。
我自从知道有“为人父母",就想来推荐此书,但是一再犹豫。因为收录的这下案例非常
非常的extreme。有幼童亲见母亲被杀,或是遭遇性侵,还有冷血少年杀手,遭邪教洗
脑的孩子,和如书名所诉,被和狗一起圈养的孤儿。这绝对不是一个“容易”读的书。
我一直认为我的心里承受能力很不错,但是两次读此书,我都经常要take a break,我
觉得很多有孩子的人都会觉得这本书读不下去。
但是,我从这本书里学到很多... 阅读全帖 |
|
|
|
|
|
c**i 发帖数: 6973 | 13 (1) Well, the turning point was Midway, which place, a year before
Guadalcanal Campaign (Aug 7, 1942-Feb 9, 1943).
George Will, On Lybia, Too Many Questions. Washington Post, Mar 9, 2011.
http://www.washingtonpost.com/wp-dyn/content/article/2011/03/08
("The tide-turning defeat of Japan's navy at the Battle of Midway occurred
June 7, 1942 - exactly six months after Pearl Harbor")
(2) I recently read a book review on the sea clash of Guadalcanal Campaign.
Ronald Spector, Near a Small Island, a Gig... 阅读全帖 |
|
d******i 发帖数: 7160 | 14 就这"科学方法"?笑死人啊。
Scientific method
Ibn al-Haytham (Alhazen) was a significant figure in the history of
scientific method, particularly in his approach to experimentation,[49][50][
51][52] and has been described as the "world's first true scientist".[53]
Avicenna made rules for testing the effectiveness of drugs, including that
the effect produced by the experimental drug should be seen constantly or
after many repetitions, to be counted.[54] The physician Rhazes was an early
proponent of experimen... 阅读全帖 |
|
b*******y 发帖数: 331 | 15 自动化程度高,那些boring repetitive-pressue的工作丢给programmed robot干了,
解放活人,让活人做一些必要的
有趣的工作
而富士康的生产线是把活人当作robot干,时间长了,活人也变活死人了 |
|
d*****u 发帖数: 17243 | 16 根据我的观察,他患有轻度口吃,所以performance受一点影响
不代表他思维不敏捷
网上搜的
When I first heard Barack Obama’s hesitant and repetitive speech, I decided
to look up “stuttering” to make sure that’s actually what it was and it
seems to fit the definition. I personally thought it was amazing that
someone with such touted oratory skills had dysphonic problems. With what
little people actually do know about his past, I think the childhood
psychiatric etiology is of particular interest. Being familiar with several
people who do ... 阅读全帖 |
|
k*****r 发帖数: 21039 | 17 高考如果开卷,拿回家一边喝着冷饮,一边慢慢的作,大部分人都能得过90多100.
无它,唯熟尔。
主席当年就有光辉论断,if so, why bother torture students with all those
repetitive training ? |
|
g*****c 发帖数: 4378 | 18 Smith Act
conspiracy government overthrow action advocacy violence force agreement
The Smith Act (54 Stat. 670) of 1940 proscribed, among other things, the
advocacy of the forcible or violent overthrow of the government. The act
became the analogue of the New York Criminal Anarchy Act sustained in GITLOW
V. NEW YORK, 268 U.S. 652, 45 S. Ct. 625, 69 L. Ed. 1138 (1925). New York
had passed that law in 1902, shortly after the assassination of President
WILLIAM MCKINLEY. Between the occupation of Cz... 阅读全帖 |
|
|
I********l 发帖数: 8702 | 20 齐泽克的观点,还是颇有点修正主义。
要点:
1. 社会现实推动人民走向革命。This necessary disappointment serves as a
reminder of the basic impotence of the social-democratic Left and thus push
the people towards a new radical revolutionary Left.
2. 新自由资本主义取代“共产主义”对人民而言,只是跳出火坑,又入油锅。
So where does the Left stand today? Alain Badiou wonderfully characterized
the post-Socialist situation as "this troubled situation, in which we see
Evil dancing on the ruins of Evil": there is no question of any nostalgia,
the Communist regimes were "ev... 阅读全帖 |
|
p****m 发帖数: 510 | 21 国人的冷漠到了无以复加的地步了。 富士康那么多人跳楼自杀。国人是一边骂富士康
,一边送钱给苹果。
一个有良知的美国果轮到了中国看了苹果产品加工厂,就决定不买苹果产品了。 国人
呢当你用着苹果的产品的时候,有没有想过上面负你们同胞的的生命,身体和精神的健
康?当我看了以下的文章的时候,感觉到中国人真是没救了。
以下转贴。
http://finance.yahoo.com/news/Mike-Daisey-goes-after-Apple-apf-
Mike Daisey goes after Apple, the late Steve Jobs
Mike Daisey goes after Apple in his new monologue and takes on Steve Jobs'
legacy
NEW YORK (AP) -- Normally, the launch of a new Apple device such as the
iPhone 4S would make Mike Daisey salivate. But not this year.
Daisey, ... 阅读全帖 |
|
a****l 发帖数: 1696 | 22 来自wsj的一个读者评论
wumao = Wicked, Unemployed, Malicious American Ogre
This person is a typical wumao species because,
Wicked = The Chinese are working extremely hard otherwise there won't be any
food on the table, and he perceives that as a threat to his greed and
obesity. So he spread rumors hoping China will be in chaos. This kind of
person will exchange one liter of scotch with the lives of ten thousand
Chinese.
Unemployed = While we the Chinese are forced to write in this forum because
we need to... 阅读全帖 |
|
|
|
|
I******a 发帖数: 3812 | 26 Repetition does not make a winning argument. |
|
k********k 发帖数: 5617 | 27 "Protest", "demonstration", "summon of Japanese ambassader", "indignation",
"repetitive claims that DiaoYu Island has always been China's since ancient
times"
-- ALL THESE ARE TOTALLY USE-LESS EMPTY TALK !
China must have real power on the international arena ! |
|
p****y 发帖数: 23737 | 28 More than 30 senior scientists and academics signed an open letter
condemning researchers at Tufts University (Boston) in the United States for
carrying out clinical trials of genetically modified (GM) ‘Golden Rice’
on children [1] (Scientists Protest Unethical Clinical Trials of GM Golden
Rice). The scientists claimed that the trials were in breach of the
Nuremberg Code of Ethics brought in at the end of the Second World War to
prevent any repetition of the experiments conducted by Nazi scienti... 阅读全帖 |
|
a*******t 发帖数: 10093 | 29 除了美国宪法明文规定,“政教分离”、“不设国教”之外
美国钱币上的“in god we trust”,美国最高法院是有明确解释的
---------------------------------------------------------------------
“uch practices as the designation of "In God We Trust" as our national
motto, or the references to God contained in the Pledge of Allegiance to the
flag can best be understood, in Dean Rostow's apt phrase, as a form a "
ceremonial deism," [Footnote 2/24] protected from Establishment Clause
scrutiny chiefly because they have lost through rote repetition any
signif... 阅读全帖 |
|
R****a 发帖数: 6858 | 30 大棋局与9/11
来源: ognc 于 2013-02-22 16:08:44[档案] [博客] [旧帖] [转至博客] [给我悄悄
话] 本文已被阅读:63次
字体:调大/调小/重置 | 加入书签| 打印| 所有跟帖 | 加跟贴| 查看当前最热讨论主题
The Moral Decoding of 9-11
By Prof. John McMurtry
(Journal of 9/11 Studies) - I was sceptical of the 9-11 event from the first
time I saw it on television. It was on every major network within minutes.
All the guilty parties were declared before any evidence was shown. The
first questions of any criminal investigation were erased. Who had the most
compelling motives for... 阅读全帖 |
|
r*****6 发帖数: 731 | 31 repetition-------要死你就死,要装你就装,你自己决定吧。
我对你到底是河北的,东北的,天津的痞子,还是在北京垫底的胡同串子阶层,根本
不在意。 |
|
k*****r 发帖数: 21039 | 32 不是雪村童子爆料:
For the second time in a month, Hewlett-Packard has been forced to admit it
built secret backdoors into its enterprise storage products.
The admission, in a security bulletin posted July 9, confirms reports from
the blogger Technion, who flagged the security issue in HP’s StoreOnce
systems in June, before finding more backdoors in other HP storage and SAN
products.
The most recent statement from HP, following another warning from Technion,
admitted that “all HP StoreVirtual Storage sys... 阅读全帖 |
|
S*****s 发帖数: 7520 | 33 没错,弹这个行业就是不断的copy,不断的repetitive然后研究技巧提高了就牛逼了。
我刚才说了,咱们国家的京剧都能甩钢琴家三条街,因为京剧是有派的,曲调和台词没
有区别,但是唱腔截然不同
老生 有马派,麒派 杨派,余派....
朗朗如果能演奏出一个朗派,哪怕他没有创做曲子,我也服了 |
|
x****y 发帖数: 1853 | 34 海军的网页上写了,技术难点是:
Research Opportunities
Advanced thermal management techniques for long slender metal rail
structures
Extended service life for materials and components in harsh environment
High-strength, dielectric, structural materials
High-speed, high-current metal-on-metal sliding electrical contact
System interfaces between high-power loads and platform power distribution
Compact pulsed power systems and power electronics High-conductivity, high-
strength, low-density conductors
Repetitive r... 阅读全帖 |
|
v***0 发帖数: 5096 | 35 http://news.yahoo.com/china-warplane-made-dangerous-pass-us-air
n-174953328.html
这个IDjavelin 每次回帖都是下面这句开头
"I am a Chinese working as a China analyst at a think tank. It is becoming m
ore and more apparent to many people, that the ruling Chinese Communist Part
y (CCP) knows it is on its last straw of survival.
"
javelin's Comments All Comments
[javelin]
javelin (6)
Last Activity2 hours ago
China warplane made 'dangerous' pass at US aircraft: Pentagon
[javelin]
jave... 阅读全帖 |
|
m***d 发帖数: 1050 | 36 Although we don't know if the black "angel" is a Double-B, we are pretty
sure its very Sha -B if you made your post repetitively... |
|
b********n 发帖数: 38600 | 37 http://reece.liberty.me/2015/03/09/25-statist-propaganda-phrase
In the discourse of statists, there is a group of phrases of which one or
more tend to be present in nearly every argument.
While this is not an exhaustive listing of that group, it does contain
twenty-five of the most common phrases that statists use in their arguments.
As propaganda has a tendency to be repetitive, some of these phrases
contain the same logical fallacies, and will therefore have similar
refutations. As such, the p... 阅读全帖 |
|
f********4 发帖数: 2883 | 38 我开始研究梁彼得案,终于想明白了是什么使梁彼得开枪:肌肉记忆 muscle memory。
Wiki词条:
Muscle memory has been used synonymously with motor learning, which is a
form of procedural memory that involves consolidating a specific motor task
into memory through repetition. When a movement is repeated over time, a
long-term muscle memory is created for that task, eventually allowing it to
be performed without conscious effort. This process decreases the need for
attention and creates maximum efficiency within the motor and memory syst... 阅读全帖 |
|
发帖数: 1 | 39 hina Nationalist 12 hours ago
That's why the Asians are more successful than those lazy non productive
libtards who live on free money and Obama care
REPLY
1
学了另一个词 libtard -As repetitive as it sounds, it stands for "liberal
retard."
应该就是我汉的 左臂 |
|
t******l 发帖数: 10908 | 40 但 cantor 的第一个问题,是没有刷过 leetcode,没有注意到可计算性以及香浓有限
信息量的情况。。。(当然,cantor 也可能早就知道,但是作为高维生物玩弄一下低
维生物,所以 cantor 故意不说)。
这样这个 permutation (with repetition) on infinite length sequence,直接生生
造出了许许多多以前从来没看到过的“不可计算数”,原因是那种数的香浓信息量无穷
大。。。(顺便说一句,sqrt(2) 是可计算数,虽然是无限不循环小数,因为其携带的
信息量不是无穷大,或者说有有限长度的生成规则产生,即使序列长度是无穷长且没有
肉眼直接看得见循环 pattern,这不等于没有理论上的 pattern。。。当然这又要回到
哥德巴赫猜想,是不是所有的 pattern 都基于同余循环的问题)。
这种不可计算数多如牛毛的程度,到不管是 dedekind cut 随便来一刀,还是 cauchy
sequence 随处震三下,其结果是数学上严格精确的 100% 的概率出现的是不可计算数
,数学上严格精确的 0% 的概率出现的是可计算数... 阅读全帖 |
|
t******l 发帖数: 10908 | 41 另外评书到最后基本都开始忘了初衷了。。。我觉得初衷是在于,我个人认为讨论不可
计算数是玄学,不可计算数是 cantor diagonal argument 的无限序列上的排列树 (
permutation w/ repetition) 搞出来的,在马工实践上球用没有。
而这一切最终归结于测度论的必须的地位。。。而测度论的必须的地位,是因为理论纯
数学家认为绝对无二义性的集合论是数学的基础,最终导致无法避免用无限个没有大小
的点拼出整个时空的测度论攻略大全的问题。
但还是数学家目前还是证不出哥德巴赫猜想。 |
|
发帖数: 1 | 42 你不无知,你来讲讲德国人是不是认为他们是自卫的。 我帮你起个头,呵呵。
What are we fighting for?
We are fighting for our most valuable possession: our freedom. We are
fighting for our land and our skies. We are fighting so that our children
will not be slaves of foreign rulers. That is in no way an exaggeration or
empty phrase.
We know the English. We know about Versailles, about the colonies England
stole from us, about the Ruhr, about Golzheimer Heath, about the starvation
blockade. We know that we will be slaves if we do not w... 阅读全帖 |
|
x*****8 发帖数: 10683 | 43 对我后来学统计和计算机帮助很大。
现在考大家几个简单的概率统计题目。这几个题目是关于partition的,最终与黎曼猜
想有一点点联系。我拿它们考我的美国著名大学数学系毕业的同事,他们都不会解。因
为他们没有像我这样初中和高中一直在进行数学竞赛培训。
1)How many ways are there to choose 7 letters from the alphabet,
with repetition? (a.k.a. 7-letter words distinct up to anagrams). 答案不是
简单的26^7。
2) How many ways are there to tile a 1 × 10 rectangle with 1 × 1
and 1 × 2 tiles? |
|
|
O*******d 发帖数: 20343 | 45 earworms
An earworm, sometimes known as a brainworm,[1] sticky music, stuck song
syndrome,[2] or Involuntary Musical Imagery (IMI)[3] is a catchy piece of
music that continually repeats through a person's mind after it is no longer
playing.[4] Phrases used to describe an earworm include "musical imagery
repetition", "involuntary musical imagery", "cognitive itch" and "stuck song
syndrome".[1][5][6]
The word earworm is a calque from the German Ohrwurm, which has had this
sense since the mid-20th ... 阅读全帖 |
|
u***r 发帖数: 4825 | 46 https://www.rt.com/news/481856-turkish-soldiers-killed-airstrike-idlib/
27 Feb, 2020 21:21 / Updated 2 hours ago
At least 33 Turkish servicemen have been killed in an airstrike in Syria’s
Idlib province, while an unspecified number of soldiers were injured.
Turkish officials attributed the strike to the Syrian military.
“In Idlib, Turkey’s armed forces were targeted by the regime elements in
an airstrike,” Hatay province Governor Rahmi Dogan told the media late on
Thursday. While he originally s... 阅读全帖 |
|
x****u 发帖数: 12955 | 47
It's super long, and have to be uniform with a very strict tolerant,and it
needs to have a slit open for the slide, and sealed by a movable piece of
metal moving at very fast speed following the slide, and it has to be strong
enough to withstand thousands of repetition without malfunction, |
|
g********d 发帖数: 4174 | 48 http://www.stopthedeportations.com/
This tremendous news comes after months of advocacy by national immigration
law and policy groups, LGBT organizations and advocates including The DOMA
Project. While The DOMA Project has focused primarily on stopping
deportations, we have also engaged in wide-ranging advocacy and provided
legal representation in related cases where couples are fighting separation
or exile.
As readers of this site know, since July 2010 we have filed more than a
dozen alien rela... 阅读全帖 |
|
a****g 发帖数: 211 | 49 You know, it is repetitive.
One a while in these years, we are told the second important Al Qaeda leader
was captured/killed, sort of thing. |
|
c****n 发帖数: 21367 | 50 media theory tells us, even though you explicitly knows it
is inaccurate, after repetitive receptions, you'll believe it
or at least propagate it...
so whether people aware or not the media bias does not really matter
only science can defeat media propaganda.
a |
|