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Biology版 - Alternative splicing 分析软件 rMATS 和 MAJIQ哪个更好一些?
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相关话题的讨论汇总
话题: majiq话题: splicing话题: rmats话题: suppa
进入Biology版参与讨论
1 (共1页)
b**********n
发帖数: 1
1
请教版上生信大牛
J*****w
发帖数: 1
2
Systematic evaluation of differential splicing tools for RNA-seq studies
https://academic.oup.com/bib/article/21/6/2052/5648232
J*****w
发帖数: 1
3
Systematic evaluation of differential splicing tools for RNA-seq studies
https://academic.oup.com/bib/article/21/6/2052/5648232
MAJIQ and SUPPA detected overall the highest proportion of the qPCR-
validated DS genes across the data sets (MAJIQ 88% and SUPPA 71% in the MVS
data set; MAJIQ 94% and SUPPA 97% in the HVS data set).
b**********n
发帖数: 1
4
多谢
请问序列比对软件Hisat2 和 STAR 哪个更好一点?

MVS

【在 J*****w 的大作中提到】
: Systematic evaluation of differential splicing tools for RNA-seq studies
: https://academic.oup.com/bib/article/21/6/2052/5648232
: MAJIQ and SUPPA detected overall the highest proportion of the qPCR-
: validated DS genes across the data sets (MAJIQ 88% and SUPPA 71% in the MVS
: data set; MAJIQ 94% and SUPPA 97% in the HVS data set).

1 (共1页)
进入Biology版参与讨论
相关主题
怎么找RNA splicing variants? 有相关的数据库吗?求教:怎么定义splicing site mutation
mitochondrial也遵循中央法则吗?请教:如何灵敏检测 40-50 nt viral RNA
关于RNA-seq的问题谁来答疑一下?
RNA Seq analysis softwareRe: questions about the latest version of human genome
DEEP SEQUENCEING? ANY SUGGESTIONRe: 检测基因表达变化时,RT-PCR和Northern blot首选哪个?
汗了个去,我的引物出啥问题了A question about Knock-in Targeting!!!
发现了alternative splicing form 但是没有蛋白表达,有必要继要分析一些isoform,请问到底有哪些数据是RNA concentrated的?
用RNA-seq的data看alternative splicing?Protein Posttranslational modification问题求教
相关话题的讨论汇总
话题: majiq话题: splicing话题: rmats话题: suppa