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全部话题 - 话题: novo
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j*****y
发帖数: 121
1
发信人: jeffsky (半夏决明子), 信区: Pharmaceutical
标 题: 代友发:Scientist in DSP in Novo Nordisk R&D Center China
关键字: 生物制药 工作 回国 求职
发信站: BBS 未名空间站 (Wed Aug 21 19:07:21 2013, 美东)
Novo Nordisk R&D Center China
Mini-pilot – Senior/Principal Scientist in DSP
Zhongguancun Life Science Park, Beijing
Novo Nordisk is a focused healthcare company and a world leader in diabetes
care. Novo Nordisk China R&D (NNRCC) is an integrated part of Novo Nordisk R
&D organization. Novo Nordisk wants to conduct pharmaceutical re... 阅读全帖
j*****y
发帖数: 121
2
Novo Nordisk R&D Center China
Mini-pilot – Senior/Principal Scientist in DSP
Zhongguancun Life Science Park, Beijing
Novo Nordisk is a focused healthcare company and a world leader in diabetes
care. Novo Nordisk China R&D (NNRCC) is an integrated part of Novo Nordisk R
&D organization. Novo Nordisk wants to conduct pharmaceutical research
activities in China and expand its network to the scientific community. For
this purpose a new position is open for a dedicated and motivated Senior
Scientist/... 阅读全帖
j*****y
发帖数: 121
3
Novo Nordisk R&D Center China
Mini-pilot – Senior/Principal Scientist in DSP
Zhongguancun Life Science Park, Beijing
Novo Nordisk is a focused healthcare company and a world leader in diabetes
care. Novo Nordisk China R&D (NNRCC) is an integrated part of Novo Nordisk R
&D organization. Novo Nordisk wants to conduct pharmaceutical research
activities in China and expand its network to the scientific community. For
this purpose a new position is open for a dedicated and motivated Senior
Scientist/... 阅读全帖
j*****y
发帖数: 121
4
Novo Nordisk R&D Center China
Mini-pilot – Senior/Principal Scientist in DSP
Zhongguancun Life Science Park, Beijing
Novo Nordisk is a focused healthcare company and a world leader in diabetes
care. Novo Nordisk China R&D (NNRCC) is an integrated part of Novo Nordisk R
&D organization. Novo Nordisk wants to conduct pharmaceutical research
activities in China and expand its network to the scientific community. For
this purpose a new position is open for a dedicated and motivated Senior
Scientist/... 阅读全帖
j*****y
发帖数: 121
5
Novo Nordisk R&D Center China
Mini-pilot – Senior/Principal Scientist in DSP
Zhongguancun Life Science Park, Beijing
Novo Nordisk is a focused healthcare company and a world leader in diabetes
care. Novo Nordisk China R&D (NNRCC) is an integrated part of Novo Nordisk R
&D organization. Novo Nordisk wants to conduct pharmaceutical research
activities in China and expand its network to the scientific community. For
this purpose a new position is open for a dedicated and motivated Senior
Scientist/... 阅读全帖
J*******i
发帖数: 3588
6
来自主题: Automobile版 - 加州Trial De Novo律师
有个超速小罚单,本人申诉
一审Trial by Written Declaration败诉,又申了Trial De Novo
后来发现Trial De Novo必须本人出席,因路程太远,没法去
有没有版友有对策或者律师推荐?
e****s
发帖数: 117
7
It’s big, it’s global and it’s all about finance
The Novo Nordisk Global Finance Graduate Programme is designed to provide
new employees with comprehensive knowledge of the Novo Nordisk finance
operation and a solid understanding of our underlying business. The two-year
programme accelerates development through challenging assignments and
working conditions, professional coaching and feedback as well as excellent
learning environments. It consists of 3-4 rotations within the finance
organisation
I*****h
发帖数: 470
8
来自主题: Biology版 - 谁能讲讲de novo assembly?
细菌基因组测完发现与reference菌株的基因组有97%可以map上
剩下~120 kb map不上,
现在要决定是不是要做de novo assembly,测序的原始的数据都有了,这个de novo
assembly 是不是不用重测而只是重新做另一种生物信息学分析而已?要2000刀这么多
w*******y
发帖数: 60932
9
来自主题: _DealGroup版 - 【$】Ainol NOVO 7" Tablet $155
Ainol NOVO 7" Tablet
Device Specs
PROCESSOR: Allwinner "Many Cores" A10 Cortex-A8 processor @ 1ghz
This is possibly the best processor in our lineup of devices. Flawless video
playback, even over HDMI. Excellent Gaming Performance. Ridiculously smooth
Android UI experience. Quick Web Browsing and page loading speeds.
MEMORY: 512 MB DDR3
GPU: Mali 400
Provides Excellent Gaming Performance, Same GPU that is used in the Samsung
Galaxy SII.
BUILT-IN STORAGE: 8 Gb
OS: Android 2.3
SCREEN: 7" 800x480 L... 阅读全帖
w*******y
发帖数: 60932
10
7" Ainol Novo 7 Elf ICS 4.0 Tablet PC HD Screen 8GB 1GB RAM Camera HDMI
CPU: All Winner A10, 1.2GHz; GPU: Mali 400
OS: Android 4.0
RAM: 1GB, DDR3
Nand Flash: 8GB
Screen: 7 inch, Capacitive Screen, 1024 x 600
Camera: Yes, front 2.0 megapixels
Gravity Sensor: Yes
Multi-Touch: Yes, 5 points touch
Flash: Yes, support Flash 11.1
Android Market: Yes
Extend Port:
1 x TF card port
1 x MINI USB port; 1 x MINI HDMI port
1 x 3.5mm earphone port
Price: $147.99+ Free Shipping
Linky:
http://www.pandawill.com/... 阅读全帖
v*****r
发帖数: 35
11
来自主题: Automobile版 - 加州的Trial De Novo是怎么回事?
我的Trial By Written Declaration失败了,还是判定Guilty,不过说是20天之内可以
Submit a request for new trial (Trial De Novo).这个好像是张表,那这张表填什
么呢?法官没有说明任何理由,我们怎么再申辩呢?填写这张表之后呢?什么时候上庭
申诉呢。人在加州。
非常感谢!
f*******n
发帖数: 12623
12
来自主题: Automobile版 - 加州的Trial De Novo是怎么回事?
你要求trial de novo之后他们就安排一个时间给你上庭。
p**********u
发帖数: 15479
13
Costco 门口摆着。我去体验了一下。真心感慨啊,7000块钱的按摩椅,不管是inada
还是human touch 真舒服。Novo 就是最新一代,滚轮的行程很长。可以从脖子那里刮
痧,一直到屁股下面都能按摩到。啊呀,好多过去疏忽的穴位啊。
然后还有类似Inada yume的反向拉伸功能。据说人呢,两个脚长短不一样的。所以需要
反向拉伸,非常舒服。
下面以后,连走路都是轻飘飘的。可见按摩椅不在乎品牌。而是功能。另外,一说日本
货inada,连human touch都佩服。
M****e
发帖数: 70
14
来自主题: Biology版 - De NOVO drug (peptide) design
talking about de novo peptide-derived drug design, i have an
idea using biosensor for such investigation. basically, i
would like to assess and evaluate the binding affinity of the
peptide to the known receptor as well as its downstream signaling
transductivity. so i may design two chips (biomembrane-based),
both approapriately covered by the receptors, with one linking
to some biosensor that basically detect the affinity, while the
other coupled to the primary downstream signal transducer while
x*****d
发帖数: 704
15
来自主题: Biology版 - 谁能讲讲de novo assembly?

如果你用Tophat做的mapping,输出文件有unmapped reads。把这些unmapped reads用
Trinity做de novo assembly,看看是什么菌株。因为你的基因组有97%都能map,所以
你测的不太可能是一种新的物种。
j****n
发帖数: 3370
16
来自主题: Biology版 - 谁能讲讲de novo assembly?
是不是之前做的single end sequencing 毕竟有reference genome
现在要做de novo assembly 要重新做paired sequencing?

★ 发自iPhone App: ChineseWeb 1.0.3
n*******r
发帖数: 376
17
【 以下文字转载自 Biology 讨论区 】
发信人: newlander (newlander), 信区: Biology
标 题: 谁知道Novo Nodisk scientist or senior scientist 的salary 情况? 谢谢。
发信站: BBS 未名空间站 (Tue Jun 17 08:00:00 2008)
>5 years postdoc can get a senior scientist position? Thanks.
w*******y
发帖数: 60932
18
Specification:
- Operating System: Android 4.0 OS
- CPU: JZ4770譈urst CPU 1.0GHz
- CPU Frequency: 1.0GHz
- GPU: GC860
- RAM: 512 MB
- RAM Type: DDR2
- Internal Memory: 8GB
- Card Reader: MicroSD Card / TF Card 32GB Max.
- Screen Size: 7 inches
- Screen Resolution: 800x480 pixels
- Screen Type: Capacitive
- Video Formats: MOV, MKV, AVI, RM, TP, VOB, DAT, MPEG, MP4, PMP, 3GP, FLV,
WMV, MPG
- Audio Formats: MP3, WMA, WAV, APE, FLAC, OGG, AAC
- eBook Formats: txt, fb2, pdb, pdf, epub, mobi
- Image Fo... 阅读全帖
g******t
发帖数: 230
19
http://www.nytimes.com/pages/health/research/index.html
Scientists Link Gene Mutation to Autism Risk
Kevin P. Casey for The New York Times
Teams of scientists working independently have for the first time identified
several gene mutations that they agree sharply increase the chances that a
child will develop autism. They have found further evidence that the risk
increases with the age of the parents, particularly in fathers over age 35.
The gene mutations are extremely rare and together account ... 阅读全帖
m***r
发帖数: 21
20
Senior Research Associate - Target Discovery & Validation Job, Novo Nordisk
Inc.
Location: Seattle, WA, US
Novo Nordisk is a world leader in protein therapeutics. We are determined to
discover and develop superior biologics to control chronic inflammatory
conditions and continue significant innovation in this area.
We have established a research site in Seattle, aiming at employing 80
people by the end of 2011. We are looking for:
Auto req ID 4754BR
Title: Senior Research Associate - Target Disc... 阅读全帖
b*****9
发帖数: 8922
21
来自主题: Returnee版 - [合集] 北京印象
☆─────────────────────────────────────☆
bronzewolf (铜之狼) 于 (Sun Aug 29 09:11:50 2010, 美东) 提到:
短期回北京。因为又有人邀请回去工作,自己因为父母的原因也在考虑,所以比以前更
“认真”地考查了一下。时间很多,其实只是管中窥豹。
1)食。一般的居民区超市,食品大约是美国的1/3(主食、低质量水果、饮料)到4/3(高
级水果),这是我粗略的估计,因为我对美国超市价格其实不太注意。饭馆的花销大概
是美国的1/2。综合来看,吃上的花销应该是美国的1/2左右。
2)衣。很便宜的有,大概是美国的1/3到1/2。但是如果想看不上去不老土,最好买跟美
国价格仿佛的衣物。如果去酒吧之类的地方,还是最好买点品牌的潮货,那个价格就没
谱了。综合来看,对我而言,衣服的花销应该是和美国差不多。
3)行。北京的公交车跟以前比不算很挤,但是还是不舒服,冬冷夏闷。地铁不错,就是
线路少,但是在修。出租车非常便宜,但是一旦有点雨、上下班高峰,也就是你想打车
的时候,一定打不到。所以如果在北京常住,不管如何堵、如何不好开,... 阅读全帖
m***r
发帖数: 21
22
Senior Research Associate - Target Discovery & Validation Job, Novo Nordisk
Inc.
Location: Seattle, WA, US
Novo Nordisk is a world leader in protein therapeutics. We are determined to
discover and develop superior biologics to control chronic inflammatory
conditions and continue significant innovation in this area.
We have established a research site in Seattle, aiming at employing 80
people by the end of 2011. We are looking for:
Auto req ID 4754BR
Title: Senior Research Associate - Target Disc... 阅读全帖
w****3
发帖数: 14
23
I did it for my friend's friend.
Please contact [email protected]
(function(){try{var s,a,i,j,r,c,l,b=document.getElementsByTagName("script");l=b[b.length-1].previousSibling;a=l.getAttribute('data-cfemail');if(a){s='';r=parseInt(a.substr(0,2),16);for(j=2;a.length-j;j+=2){c=parseInt(a.substr(j,2),16)^r;s+=String.fromCharCode(c);}s=document.createTextNode(s);l.parentNode.replaceChild(s,l);}}catch(e){}})();
/* ]]> */
directly.
Novo Nordisk Diabetes Research
Zhongguancun Life Science Park, Beijing... 阅读全帖
m****M
发帖数: 360
24
来自主题: JobHunting版 - 想回北京的,学生物的看过来
前一阵子想回去,就联系了一个位置。现在不想回去了,有个位置,北京的。是一个
非常好的外企,在糖尿病研究上第一。有愿意回北京的,请直接和上面的EMAIL联系。
Novo Nordisk Diabetes Research Molecular biology scientist in China
Zhongguancun Life Science Park, Beijing
Novo Nordisk is a focused healthcare company and a world leader in diabetes
care. Novo Nordisk China R&D (NNST) is an integrated part of Novo Nordisk R&
D organization. Novo Nordisk wants to conduct diabetes research activities
in China and expand its network to the scientific community. For these
purposes, a ne
m****M
发帖数: 360
25
来自主题: Postdoc版 - Job in Beijing (Molecular Biology)
前一阵子想回去,就联系了一个位置。现在不想回去了,有个位置,北京的。是一个
非常好的外企,在糖尿病研究上第一。有愿意回北京的,请直接和上面的EMAIL联系。
Novo Nordisk Diabetes Research Molecular biology scientist in China
Zhongguancun Life Science Park, Beijing
Novo Nordisk is a focused healthcare company and a world leader in diabetes
care. Novo Nordisk China R&D (NNST) is an integrated part of Novo Nordisk R&
D organization. Novo Nordisk wants to conduct diabetes research activities
in China and expand its network to the scientific community. For these
purposes, a ne
m****M
发帖数: 360
26
来自主题: Returnee版 - 北京印象
前一阵子想回去,就联系了一个位置。现在不想回去了,有个位置,北京的。是一个
非常好的外企,在糖尿病研究上第一。有愿意回北京的,请直接和上面的EMAIL联系。
Novo Nordisk Diabetes Research Molecular biology scientist in China
Zhongguancun Life Science Park, Beijing
Novo Nordisk is a focused healthcare company and a world leader in diabetes
care. Novo Nordisk China R&D (NNST) is an integrated part of Novo Nordisk R&
D organization. Novo Nordisk wants to conduct diabetes research activities
in China and expand its network to the scientific community. For these
purposes, a ne
m****M
发帖数: 360
27
来自主题: Returnee版 - 想回北京的,学生物的看过来
前一阵子想回去,就联系了一个位置。现在不想回去了,有个位置,北京的。是一个
非常好的外企,在糖尿病研究上第一。有愿意回北京的,请直接和上面的EMAIL联系。
Novo Nordisk Diabetes Research Molecular biology scientist in China
Zhongguancun Life Science Park, Beijing
Novo Nordisk is a focused healthcare company and a world leader in diabetes
care. Novo Nordisk China R&D (NNST) is an integrated part of Novo Nordisk R&
D organization. Novo Nordisk wants to conduct diabetes research activities
in China and expand its network to the scientific community. For these
purposes, a ne
c*******h
发帖数: 72
28
看中T家一款钻石,准备下单了。在版上看到Tiffany买GC九折的说法,不知道大家是否
知道如何操作?
同时分享一下经验同时还有些钻石选择的问题。
看中的是T家,1.33ct, G, VS1, Classic 6-Prong.
其实本来是冲着T家Novo去的,在网上转了一个月了才有时间去。可是没想到看到朝思
暮想的Novo时很有点失望,可能还是自己的budget不够豪华,同样的ctw, cushion cut
和brillian round比小不少。正在犹豫不决的时候,一看到这款1.33的Classic Round
Brilliant,简直一见钟情,腿都要软了的那种感觉(现在可以理解色戒里面的汤唯啦
!)当时和LD说,没想到自己还是性格投降了虚荣,原来还是喜欢大的。
其实自己是喜欢经典简单的造型,所以喜欢上Novo那种现代的感觉,没想到其实
classic的戴在手上也很简单,因为单颗钻石在中间,然后是光光的项圈,反而是自己
最喜欢的。其他的embrace, legacy, 很快就被否决。
当天又到附近的Cartier转了一下,发现原来价钱差不多,他们家4脚的设计真的很经典
而且戴在手上... 阅读全帖
p****y
发帖数: 23737
29
【 以下文字转载自 Returnee 讨论区 】
发信人: mitFAM (fatty), 信区: Returnee
标 题: 想回北京的,学生物的看过来
发信站: BBS 未名空间站 (Mon Aug 30 07:46:48 2010, 美东)
前一阵子想回去,就联系了一个位置。现在不想回去了,有个位置,北京的。是一个
非常好的外企,在糖尿病研究上第一。有愿意回北京的,请直接和上面的EMAIL联系。
Novo Nordisk Diabetes Research Molecular biology scientist in China
Zhongguancun Life Science Park, Beijing
Novo Nordisk is a focused healthcare company and a world leader in diabetes
care. Novo Nordisk China R&D (NNST) is an integrated part of Novo Nordisk R&
D organization. Novo Nordisk wants
m****M
发帖数: 360
30
http://www.mitbbs.com/article_t0/Returnee/13061755.html
前一阵子想回去,就联系了一个位置。现在不想回去了,有个位置,北京的。是一个
非常好的外企,在糖尿病研究上第一。有愿意回北京的,请直接和上面的EMAIL联系。
Novo Nordisk Diabetes Research Molecular biology scientist in China
Zhongguancun Life Science Park, Beijing
Novo Nordisk is a focused healthcare company and a world leader in diabetes
care. Novo Nordisk China R&D (NNST) is an integrated part of Novo Nordisk R&
D organization. Novo Nordisk wants to conduct diabetes research activities
in China and expand its netwo
j*p
发帖数: 411
31
I forgot to talk about de novo assembly, and thank you for making this point.
For de novo assembly, you can try SOAPdenovo" http://soap.genomics.org.cn/soapdenovo.html", BGI actually has a lot SOAP series, I've never tried and compared to the others, but will soon, I guess.
I did try trinity from Broad "http://trinityrnaseq.sourceforge.net/". very similar algorithms, but people from Broad definitely have more connections than BGI, and I guess that was the main reason why their story gets publish... 阅读全帖
j*p
发帖数: 411
32
I forgot to talk about de novo assembly, and thank you for making this point.
For de novo assembly, you can try SOAPdenovo" http://soap.genomics.org.cn/soapdenovo.html", BGI actually has a lot SOAP series, I've never tried and compared to the others, but will soon, I guess.
I did try trinity from Broad "http://trinityrnaseq.sourceforge.net/". very similar algorithms, but people from Broad definitely have more connections than BGI, and I guess that was the main reason why their story gets publish... 阅读全帖
d**********2
发帖数: 831
33
Rate of de novo mutations and the importance of father’s age to disease
risk
Nature 488, 471–475 (23 August 2012)
Mutations generate sequence diversity and provide a substrate for selection.
The rate of de novo mutations is therefore of major importance to evolution
. Here we conduct a study of genome-wide mutation rates by sequencing the
entire genomes of 78 Icelandic parent–offspring trios at high coverage. We
show that in our samples, with an average father’s age of 29.7, the average
de novo ... 阅读全帖
l**********1
发帖数: 5204
34
Ding
plus
>
April 04, 2012
The New Genetics of Autism – Why Environment Matters
by Thomas Insel
>
Last week’s autism news was about prevalence. The CDC reported a 78 percent increase in autism
prevalence since 2002. This week’s autism news is about genetics—three papers in Nature describe new
genes associated with autism. For many people, these two stories seem contradictory or, at best, unrelated.
Increasing prevalence suggests environmental factors like chemicals and microbes changing over the... 阅读全帖
d**********2
发帖数: 831
35
Rate of de novo mutations and the importance of father’s age to disease
risk
Nature 488, 471–475 (23 August 2012)
Mutations generate sequence diversity and provide a substrate for selection.
The rate of de novo mutations is therefore of major importance to evolution
. Here we conduct a study of genome-wide mutation rates by sequencing the
entire genomes of 78 Icelandic parent–offspring trios at high coverage. We
show that in our samples, with an average father’s age of 29.7, the average
de novo ... 阅读全帖
T*R
发帖数: 36302
36
Senior / Principal Scientist in Biology
Research Scientist
China - Beijing
About the department
Novo Nordisk (NN) is one of the world’s leaders in diabetes care with a
growing business in other treatment areas like obesity and hemophilia. NN
employs approximately 42,000 people in 77 countries and markets its products
in more than 165 countries. Novo Nordisk research centre in Beijing is
established in 1999 and is the first research centre established by a
foreign pharma in China. We are a fully ... 阅读全帖
g*****g
发帖数: 6798
37
http://www.chinaz.com/mobile/2011/1207/224977.shtml
全球首款Android4.0平板推出 售价不到100美元
2011-12-07 11:08 [小 大] 来源: 站长之家 评论: 0 分享至:
百度权重查询 站长交易 友情链接交换 企业建站找313建站大师,招分销商
站长之家(CHINAZ.com)12月7日报道:据外媒报道,美普思科技公司(MIPS
Technologies) 与君正集成电路公司 (Ingenic Semiconductor)在日前发布的一份
联合新闻稿中宣布推出全球首款运行谷歌Android 4.0 Ice Cream Sandwich操作系统的
廉价平板电脑Ainol Novo 7,该款平板的零售价格低于100美元。
据悉,Ainol Novo 7平板配备一个7英寸的电容式触摸屏,MIPS和君正集成电路公司还
计划在未来推出8英寸和9英寸的屏幕。该款平板采用君正的JZ4770 1GHz的单内核处理
器,还配有1个USB 2.0接口、1个HDMI 1.3a视频输出接口以及必备的MicroSD卡槽和... 阅读全帖
w**k
发帖数: 6722
38
来自主题: Stock版 - 说一说测序仪公司
首先,借用粪坑的一个帖子。多用一些语气助词,也许活着吧呀呢啊啥的
~~~~~~~~~~~~~~~~~~~
标 题: Re: 推荐股票的时候你别充大逼,斩钉截铁,牛逼哄哄的
~~~~~~~~~~~~~~~~~~~
其次,PACB以它目前的技术,平台的价格,和目前应用的范围来讲,它只能做小众市场
。这是一个已经出来很多年的技术,除非在技术和成本上大幅度改善,否则我看不到很
明亮的未来。当然,这说的不是一天一个星期一个月的走势。短期内做空做多它,或者
说几乎任何一只股票,都有可能获利。从分散风险的角度看,我认为我自己投一点钱在
PACB上其实也是可以的。我曾经做空过PACB,小赚了一点,但是在它跳崖之前的几分钟
我胆怯了,获小利走人了 --- 空悲切。为什么说PACB小众?一是成本,平台和通量的
成本。二是应用对序列长度的要求,只有de novo需要长度,所以说除了对于有
structural variation的基因来说,版上的你我和其他所有人类都不需要de novo。也
就是说,de novo除了在科研领域里,它在医疗应用领域没有什么大用途。当然如果
PACB的成本又低通量又高序列又精... 阅读全帖
G***Y
发帖数: 9698
39
来自主题: NewYork版 - 《纽约生活》4月8日~4月14日
《纽约生活》4月8日~4月14日
本报讯
April 07, 2013 06:05 AM
【4月8日 星期一】
●「混合表演」节庆New Dance Alliance Presents the 27th Annual Performance
Mix Festival
时间:7pm
地点:The Flea Theater,曼哈坦White街41号
查询:http://newdancealliance.org/
门票:成人$15,学生及耆老$10。开幕式将有三名艺术家表演,包括T.L Cowan的短片
「I Disown You Right Back」,展现她主张的不同女性主义,另外有Oren Barnoy的「
Angels My House I Promise」,以及Melinda Ring的「X Music Study」。
●博尔赫斯作品研讨会Borges and Translation
时间:7pm
地点:美洲协会,曼哈坦公园大道680号
查询:http://www.as-coa.org/events/borges-and-translation
门票:非会员$10,会员免费。美洲协... 阅读全帖
l*****0
发帖数: 51
40
来自主题: SanDiego版 - 超速罚单 OC I-405 (求安慰)
Finally got some time after the blackout...
First, wait for the letter from the court with the dollar amount and date
for court contest. Then start the following process.
1. Submit a Written Not Guilty Plea. this is the CVC 40519(b) form. See
sample below.
To contest your citation without a single court appearance, you must first
send the court a Written Not Guilty Plea. This will save the time and hassle
of appearing in court to plead not guilty in person. In the Written Not
Guilty Plea, you sh... 阅读全帖
b****r
发帖数: 17995
41
来自主题: Biology版 - 请教neurogenomics职业规划
de novo SNP 是啥?既然叫做polymorphism,那人群里起码1%,de novo怎么可能有这
么高的频率
你说SNP有small effect,理论上当然可能性是存在,但是我刚说了,起码目前做了这
么多GWAS,重复性就是非常差,绝大部分在功能上也没能解释,这个是目前的事实
至于将来的发展,还是我前面说过的,没人能预料,最安全的搞法,只能不把自己钉死
,啥热就搞啥,还有就是和医生联系起来,最好自己能拿到标本。只能仰人鼻息
至于copy number,现在做的工作还是相当少的,远远不如GWAS那种水平,你不要急于
下结论。做法的话,如果你先想到的是NGS,显然你还相当不了解这个领域,这也从另
一个角度说明了这个领域还是比较有东西可挖的。用CMA或者SNP array都可以call
copy number variation,而且比NGS便宜太多了,分辨率也不是什么10M,现在几百K可
以说很容易call出来,几十K也是常有的事。当然,现在主要还是针对基因区域。我在
clinical lab,CMA发现基因缺失或者gain并能够解释病因的比例不能说低,加上便宜
,现在来个疑... 阅读全帖
j****1
发帖数: 81
42
来自主题: Biology版 - proposal abstract
Here is another abstract, because I have to write two abstracts for my
qualifying exam.
----------------------------------------------------------------------------
-------------
Not only are neural stem cells important in learning and memory, they are
also potential therapeutic approaches for neurodegenerative and other neural
pathological diseases. Adult neurogenesis occurs in the subventricular zone
(SVZ) of the lateral ventricle and subgranular zone (SGZ) in the
hippocampus (Suh et al., 2009... 阅读全帖
l**********1
发帖数: 5204
43
来自主题: Biology版 - 基因芯片数据分析求助
De novo assembly by Trinity
http://trinityrnaseq.sourceforge.net/
References:
a, PMID 23331995
BMC Genomics. 14:41. (2013).
De novo transcriptome characterization of Vitis vinifera cv. Corvina unveils
varietal diversity.
http://www.ncbi.nlm.nih.gov/pubmed/23331995
or PMID 21572440
Nat Biotechnol. 29:644-52. (2011).
Full-length transcriptome assembly from RNA-Seq data without a reference
genome.
http://www.ncbi.nlm.nih.gov/pubmed/21572440
or PMID 22965124
Nucleic Acids Res. 40:10084-97. (2012).
... 阅读全帖
l**********1
发帖数: 5204
44
来自主题: Biology版 - 如何处理RNA-Seq
Sorry,
now pls check this one,
one historic review about almost soft what used in RNA-seq de novo assembly
task..
its slide PPTX file link, (n.b. already converted to PDF format)
HTTP double dot//www.cs.helsinki.fi/u/tomescu/traph/TKRM-HITSEQ.pdf
or attached Table here,
>
发信人: aablackk (black), 信区: Biology
标 题: Re: 如何处理RNA-Seq
发信站: BBS 未名空间站 (Sun Jan 5 02:03:36 2014, 美东)
omitted
Most of the other tools do de-novo transcript reconstruction. SLIDE seems
another unique tool that do transcript abu... 阅读全帖
l*******i
发帖数: 153
45
Bless宝宝!
请问楼主做的是exome-seq吧?宝宝父母也都测了吗?近亲有遗传史吗?如果没有,父
母均正常的话,很有可能应该就是de novo mutation了。de novo mutation在新生儿中
的发生率非常低,而且80%以上位于exon。
如果exome-seq没有发现de novo mutation,那说明mutation可能位于gene调控区,甚至
intron,上GWS或许可以发现某些异常,但是代价比较高昂。
我想说的是,像这样的基因缺陷病(姑且这么说吧,宝宝不一定是),最后即使找到了
defect的gene,对治疗可能也没你所期望的帮助。因此,我觉得,楼主现在首先要做的
是应该明确诊断,对症治疗是关键,首先把宝宝的病情控制住了,尽量减轻疾病带来的
伤害。

MCT
o****u
发帖数: 214
46
谨慎猜测你们是不是刚开始做de novo design?如果你们是业界大牛,请原谅我的唐突。
de novo design预测出来的结构,最后表达不出来的,或者折叠不了的,可以说是十有
八九。只是这样的nagative result是发不出来文章的,所以外行看了几篇N/S文章,会
有结构预测已经很成熟的错觉。比较稳妥的做法,还是要参考自然中已经存在的蛋白,
最好是结构已经测定的蛋白来做骨架,然后再通过计算修正。100aa的小蛋白或者长多
肽的折叠已经非常复杂,如果没有homologues,几乎不可能直接准确预测。
另外,de novo design很大程度是依靠统计意义的成功。一般要有上百个预测的结构,
然后在实验室做筛选。最终序列还要做上数轮的定向进化修正。只设计一个序列,然后
就运气好爆直接成功的,我是没见过。
如果有公司在1000美元提供高质量(>80%纯度)的100aa的多肽,我建议你们直接定,
这个价格非常便宜。如果你们想继续试生物表达,除了前面的建议外,你还可以试试
Profinity eXact purification kit.这个系统无需添加额外蛋白酶,加tag表达,... 阅读全帖
c*********r
发帖数: 1312
47
来自主题: Biology版 - 招人denovo assembly
如果可以的话,能稍微介绍一下工作和项目的一些信息吗?专门找de novo assembly的
职位还是不多见。
主要用到已有的de novo assembly的pipeline(Trinity,SOAP,oases等)来组装数据
,还是要自己开发?要求会C++,python编程看样子是要开发软件吗?
序列来自人、动物、植物还是微生物?Genome还是transcriptome?测序的技术是
Illumina、PacBio还是其它技术?主要是做基础研究还是有具体应用?我对这几个问题
挺感兴趣主要是想了解一下这个领域趋势。我觉得很多应用已经不能局限在仅使用
reference上,会丢掉不少参考序列里没有的但是可能有价值的信息。de novo
assembly对硬件、运算时间、算法等都要求很高,但是结果会很有价值。
谢谢!
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