n*********4
发帖数: 99 | 1 BIOINFORMATICS for Next Generation-Sequencing analysis @ ICBR of University
of Florida
RESPONSIBILITIES:
• Provide high level bioinformatics support to molecular biologists
by applying information technology and statistics to genomic and proteomic
projects;
• Evaluate available bioinformatics tools for next generation-
sequencing data and prototype new methods and algorithms to enhance existing
analysis capabilities and pipelines;
• Provide computational support for internal bioinformatics
objectives as well as for ongoing customer-driven projects, including
experimental design, analysis of gene expression, genomic and proteomics
data, algorithm and pipeline development, user training and client
interaction;
• Maintain a current awareness of new developments in the analysis
of data derived from next generation DNA sequencing instruments as it
pertains to your central focus on next generation-sequencing data analysis
REQUIREMENTS:
- Ph.D. in Bioinformatics, Computational Biology, Computer Science, or a Ph.
D. in Molecular Biology with a strong computational background.
- Working knowledge of Sanger and next generation DNA sequencing
technologies (e.g. 454, Illumina, SOLiD) and assembly data processing,
highly desirable
- Proficiency in scripting and programming languages (e.g. C++, Java, Perl,
Python desirable)
PREFERENCES:
Experience working in a Linux environment, running a cluster using SGE, PBS
and BASH shell scripting is strongly preferred.
please send email to: p*************[email protected] |
f****b
发帖数: 2410 | 2 BIOINFORMATICS for Next Generation-Sequencing analysis @ ICBR of University of Florida
RESPONSIBILITIES:
• Provide high level bioinformatics support to molecular biologists
by applying information technology and statistics to genomic and proteomic
projects;
• Evaluate available bioinformatics tools for next generation-
sequencing data and prototype new methods and algorithms to enhance existing
analysis capabilities and pipelines;
• Provide computational support for internal bioinformatics
objectives as well as for ongoing customer-driven projects, including
experimental design, analysis of gene expression, genomic and proteomics
data, algorithm and pipeline development, user training and client
interaction;
• Maintain a current awareness of new developments in the analysis
of data derived from next generation DNA sequencing instruments as it
pertains to your central focus on next generation-sequencing data analysis
REQUIREMENTS:
- Ph.D. in Bioinformatics, Computational Biology, Computer Science, or a Ph.
D. in Molecular Biology with a strong computational background.
- Working knowledge of Sanger and next generation DNA sequencing
technologies (e.g. 454, Illumina, SOLiD) and assembly data processing,
highly desirable
- Proficiency in scripting and programming languages (e.g. C++, Java, Perl,
Python desirable)
PREFERENCES:
Experience working in a Linux environment, running a cluster using SGE, PBS
and BASH shell scripting is strongly preferred.
Salary or Compensition
($35,000 - $40,000) annually
please send email to: p*************[email protected]
========================================================
发信人: university1 (guang), 信区: Biology
标 题: bioinformatics 吐下槽
Apr 25 14:28:22 2012
坦白说对genomics/sequencing技术还是很有兴趣的。也喜欢交叉科学。而且sequencing成本越来越低，越来越多的data要产生。所以我是很看好这一行的。所以本科是读生物的；然后来了美国半路转到bioinformatics。但我觉得很郁闷的是，bioinformatician好像都是在跑别人写好的program。做alignment就是BWA/bowtie；然后call SNP就是GATK/samtools啥的。也就是自学一点bash code来做一些很平常的处理；然后大规模的fastq就写一点简单的python来pre-processing
一点成就感都没有。或者说一点技术含量都没有。感觉人家CS的，学到了技术，学到了那就是自己的；以后用的到。而我们这种随便run个人家写好的program，感觉是个人就可以学会。
另外，我在的这个一般的medical school都没有CS course。我都是自学，觉得很野鸡，一点都不科班。这个破烂bioinformatics program也很一般，很小很新，都没什么人。各位在综合性大学bioinformaticics phd program的，你们都有上很正规的CS的course么？还是说CS这个东西，就是自己瞎捣弄就ok了？
所以有点想：
1.我还是很喜欢bioinformatics的。但觉得目前的状况下没什么training，都是自己摸索。所以想转到一个established的更好的bioinformatics program；但这不就把目前的老板给得罪了么
2.干脆直接转到cs的master算了。自己摸索了一年的bioinfor，对coding什么的好歹也有个大概的概念。但cs master，自己又没钱；而且担心身份出问题
大家来说说看法吧。谢谢 |
n*********4
发帖数: 99 | |
c********e
发帖数: 598 | 4
University
biologists
工资太低了吧。140K is reasonable for phD of computer science.
【在 n*********4 的大作中提到】
: BIOINFORMATICS for Next Generation-Sequencing analysis @ ICBR of University
: of Florida
: RESPONSIBILITIES:
: • Provide high level bioinformatics support to molecular biologists
: by applying information technology and statistics to genomic and proteomic
: projects;
: • Evaluate available bioinformatics tools for next generation-
: sequencing data and prototype new methods and algorithms to enhance existing
: analysis capabilities and pipelines;
: • Provide computational support for internal bioinformatics
|
S**********e
发帖数: 1789 | 5 不用顶了，您这价钱去印度，东欧， 国内试试看吧。
不要说生物信息专业，普通生物nih 标准fresh PhD 都3万9了，生物信息起价要5-6万
吧。
你还是自己学学生物信息吧，省得花钱雇人了。
【在 n*********4 的大作中提到】
: Ding
|
c********e
发帖数: 598 | 6
University
biologists
proteomic
existing
This is not a postdoc position!
【在 n*********4 的大作中提到】
: BIOINFORMATICS for Next Generation-Sequencing analysis @ ICBR of University
: of Florida
: RESPONSIBILITIES:
: • Provide high level bioinformatics support to molecular biologists
: by applying information technology and statistics to genomic and proteomic
: projects;
: • Evaluate available bioinformatics tools for next generation-
: sequencing data and prototype new methods and algorithms to enhance existing
: analysis capabilities and pipelines;
: • Provide computational support for internal bioinformatics
|
y**********n
发帖数: 478 | |
G***G
发帖数: 16778 | 8 where you found this music? it is quite interesting.but the image of the baby doesn't fit in here.
【在 y**********n 的大作中提到】
: 工资太低了，除非老板非常牛，要不谁跳这个坑？
|
g******o
发帖数: 4042 | |
y**********n
发帖数: 478 | 10 Average Bioinformatics Postdoc Salary in Piscataway, NJ: $61000
ref：http://www.indeed.com/salary/q-Bioinformatics-Postdoc-l-Piscataway,-NJ.html
【在 g******o 的大作中提到】
: 生物信息开价多少合适？
|
|
|
N******n
发帖数: 3003 | 11 如果4万，在FL，应当能招到生物方面，稍微懂一些统计的postdoc, |
n*********4
发帖数: 99 | 12 We expect people have only ONE of the following experience:
1) NGS analysis experience
2) programming skill
3) Biostatistics skill
FL living expenses is low, especially housing market.
【在 N******n 的大作中提到】
: 如果4万，在FL，应当能招到生物方面，稍微懂一些统计的postdoc,
|
g******o
发帖数: 4042 | 13 关键还是老板够不够牛屄
老板不够牛，只能靠美元砸 |
S**********e
发帖数: 1789 | 14 跟我前老板一样，我们这里生活水平低，所以。。。
请问NIH给钱的时候是不是考虑了你那生活水平低，R01给你打个7折呢？
你这点钱，连生物统计硕士工资都不够，除非你从穷国家直接找。
这3条，会其中任何一条的都可以轻松找到工作，保守估计要6-7万工资起价
【在 n*********4 的大作中提到】
: We expect people have only ONE of the following experience:
: 1) NGS analysis experience
: 2) programming skill
: 3) Biostatistics skill
: FL living expenses is low, especially housing market.
|
N******n
发帖数: 3003 | 15 主要是FL一般的Postdoc也就31000左右，所以楼主特意说35000-40000，就是说比一般
的高。
应当能找到要转行的，但经验谈不上。 如果你想快出文章，还是要找有经验的。 |
n*********4
发帖数: 99 | 16 If experienced one can not be found, we will look for a helper.
For example, running the well-built pipeline, maintaining web sites etc.
【在 N******n 的大作中提到】
: 主要是FL一般的Postdoc也就31000左右，所以楼主特意说35000-40000，就是说比一般
: 的高。
: 应当能找到要转行的，但经验谈不上。 如果你想快出文章，还是要找有经验的。
|
n*********4
发帖数: 99 | 17 I don't think you can easily get a job if you know only one of them.
It all depends on your skills and experience level.
【在 S**********e 的大作中提到】
: 跟我前老板一样，我们这里生活水平低，所以。。。
: 请问NIH给钱的时候是不是考虑了你那生活水平低，R01给你打个7折呢？
: 你这点钱，连生物统计硕士工资都不够，除非你从穷国家直接找。
: 这3条，会其中任何一条的都可以轻松找到工作，保守估计要6-7万工资起价
|
b*******n
发帖数: 8420 | 18 maintaining web sites
从国内找个大学生兼职干干就行了，一年给个6000刀他就很高兴了，翻个倍给个12000
刀一年他就把你当爹了
【在 n*********4 的大作中提到】
: If experienced one can not be found, we will look for a helper.
: For example, running the well-built pipeline, maintaining web sites etc.
|
g*********r
发帖数: 2033 | 19 大多数不牛的老板也没钱去砸你，呵呵
往往还更抠门
bioinforatics postdoc正经的很少有低于5万的
另外UF生活费不低，只是生活枯燥而已
【在 g******o 的大作中提到】
: 关键还是老板够不够牛屄
: 老板不够牛，只能靠美元砸
|
a*****c
发帖数: 2086 | 20 这叫什么postdoc，明明是bioinfomatist做的事情。做着scientist的事情，却拿着
postdoc的薪水，不要太坑爹啊。会有哪个计算机的博士愿意拿着这个工资和title来做
事么 |
l*****a
发帖数: 1431 | 21 我们这里招的bioinformatician，master degree。就是做做NGS aligment，用的就是现
成的软件，BWA，SAMtool之类，工资90K。 |
